| Protein: | dcap-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 786 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for dcap-2.
| Description | E-value | Query Range |
Subject Range |
|
|
464.0 | [0..19] | [786..42] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MEISTENWCK KPKNRSIFSK NISFQKQNKS TEEPPSSVQK LLASLQQAQN KSDLSEQPST 60
61 SKPKKNEKRK KAVAQAPASA PAPGPEEKKK QPKRASVGAR MQQQAENARI SQTKRPRQVS 120
121 TSKGSSRNT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [130-395] |
1 11 21 31 41 51
| | | | | |
1 TAPEQQNYQQ QQQQYKGPRI PTDILDELEF RFISNMVECE INDNIRVCFH LELAHWYYID 60
61 HMVEDDKISG CPNVGSRDFN FQMCQHCRVL RKYAHRADEV LAKFREYKST VPTYGAILVD 120
121 PEMDHVVLVQ SYFAKGKNWG FPKGKINQAE PPRDAAIRET FEETGFDFGI YSEKEKKFQR 180
181 FINDGMVRLY LVKNVPKDFN FQPQTRKEIR KIEWFKIDDL PTDKTDELPA YLQGNKFYMV 240
241 MPFVKDIQIY VQKEKEKLRR RKAEAV
|
| Detection Method: | |
| Confidence: | 89.0 |
| Match: | 2a6tA |
| Description: | Crystal structure of S.pombe mRNA decapping enzyme Dcp2p |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [396-455] |
1 11 21 31 41 51
| | | | | |
1 QSTPSSSIFS QLFPAQPPPP VPEDATPTRP MYKRLTSEEL FSAFKNPPAG EVARPTLPDM 60
61
|
| Detection Method: | |
| Confidence: | 11.39794 |
| Match: | 1i3qA |
| Description: | RBP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [456-625] |
1 11 21 31 41 51
| | | | | |
1 SPAVNGLDTL AVLGICTPLK PGASLNEFSG APQNCPMISE EAGSPADPSA EIGFAMPMDL 60
61 KQPVVTSDHP WQHHKISDSS APPQTLESHQ GWLDTQLVNT IMHSPNHPLP PTSNSPATPT 120
121 AVLGHLIGKP IQPQAILPQA ATPTALGSAE KPKSSRISLS DNSAFKAISS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [626-786] |
1 11 21 31 41 51
| | | | | |
1 TQKQSIPKAT AAPPSTEKTR SASLSGSSQV VGKPARNLFN SVVSPVSSGI QSIQGDGGAW 60
61 EDVWFREQLA ATTTAGTSIS SLAASNQELA MINREETPIE DPYFKQQAYQ KAQKAQSLIP 120
121 ACSQWTNSIK LDIDYVVGPL SFWMQQFSTK SPVSGTGPQL P
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
