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View Structure Prediction Details

Protein: lact-9
Organism: Caenorhabditis elegans
Length: 167 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lact-9.

Description E-value Query
Range
Subject
Range
gi|113934104, gi... - gi|167644778|ref|YP_001682441.1| beta-lactamase [Caulobacter sp. K31], gi|167347208|gb|ABZ69943.1| b...
133.0 [0..1] [166..221]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNTQLDTKE KIVPGRASYY QRNSKNILEN CPEVDCSNKF AGGGIISNTT DLLIIANAIL  60
   61 HSILSDSKNC LLQRETIRKF LEKQVPVDSK TSTGLGWFLV DGKDLKSIDG NISNSSFFYH 120
  121 TGAAVGASSV LLVNTSSGVC VAILCNLQNT TVLKLGRDIG DLFHGEI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.39794
Match: 1fcmA
Description: AMPC beta-Lactamase, class C
Matching Structure (courtesy of the PDB):

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