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View Structure Prediction Details

Protein: CE39484
Organism: Caenorhabditis elegans
Length: 178 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39484.

Description E-value Query
Range
Subject
Range
gi|39592739, gi|... - gi|39592739|emb|CAE62353.1| Hypothetical protein CBG06431 [Caenorhabditis briggsae], gi|187034010|em...
205.0 [0..1] [171..134]

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Predicted Domain #1
Region A:
Residues: [1-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEPSAPPDE AESTIRSPDL PFVSSIVGGL FAGRAIVVSG MVLPGFASDR KRFQIDLCCG  60
   61 LLIDGDHMDN KALHFNPRFD AKTGWFSGPG DDKLVINSFV SGRWGNEERF DNPFKEGEPF 120
  121 QIRIMVFEKY FKISASGKHM CDFPHRVPVE SIRTISINGN IRVDYVEFHP PEDSMPTE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.69897
Match: 2dycA
Description: No description for 2dycA was found.

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Created and Maintained by: Michael Riffle