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View Structure Prediction Details

Protein: gi|215697763, gi...
Organism: Oryza sativa Japonica Group
Length: 270 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215697763, gi....

Description E-value Query
Range
Subject
Range
gi|31432667, gi|... - gi|37535366|ref|NP_921985.1| putative esterase [Oryza sativa (japonica cultivar-group)], gb|AAP54272...
202.0 [0..34] [270..3]

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Predicted Domain #1
Region A:
Residues: [1-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTPGSCPSS TSAAHSPVCL APSAAAGESQ EMVRPRMVLF GDSITEQSFR PGGWGAALAD  60
   61 TYSRKADVVV RGYGGYNTRW ALFLLHQIFP LVGIVPPLAT TVFFGANDAA LLGRTGERQH 120
  121 VPVAEYKENL KKIVNHLKDC SKSMLIVLIT PPPIDEDGRE RFARSLYGEE ARKLPERTNE 180
  181 MAGVYASQCI ELAREMNIHC IDIWSKMQET AGWQKLYLSD GLHLTPEGNA VVHKEVVQTL 240
  241 RSVGLKAEEM PYDFPHHSRI DGSCPEKAFQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 1fxwF
Description: Platelet-activating factor acetylhydrolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.15974340242656 bayes_pls_golite062009
hydrolase activity 0.755660272658182 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.39017969987234 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle