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View Structure Prediction Details

Protein: gi|222612815, gi...
Organism: Oryza sativa Japonica Group
Length: 649 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222612815, gi....

Description E-value Query
Range
Subject
Range
gi|108706374, gi... - gi|215694836|dbj|BAG90027.1| unnamed protein product [Oryza sativa Japonica Group], gi|115450959|ref...
649.0 [0..1] [631..1]

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Predicted Domain #1
Region A:
Residues: [1-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSISYPPD DYLPAMEDNM GRLFIRSLSF DDDMEAAADD SPSTSPMPSP SATLLPAFGS  60
   61 GGKLIIEGSL SFKRREADPV QMETMISIRS PKSDKESCSS KPNATAGASR FALAGDQTPE 120
  121 DSPVIAGVAS PKHQAAAVRL QKVYKSFRTR RQLADCAVLV EQSWWKLLDF ALLKRNSVSF 180
  181 FDIEKPETAI SRWSRARMRA AKVGKGLSKD EKAQKLALQH WLEAIDPRHR YGHNLHYYYH 240
  241 RWLHCEINQP FFYWLDVGEG KD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.0
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #2
Region A:
Residues: [263-375]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNLEEHCPRW KLHKQCIKYL GPKERESYEV IVEDSRLIYK LSRQIVNTTK SRKGSKWIFV  60
   61 LSTCKTLYIG QKQKGTFQHS SFLAGGATSA AGRLIVEDGI LKAVWPHSGH YRP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [376-563]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TEQNFQEFMN FLKERNVDLT DVMLNPSEGE DDAEFSLKSS HSRQDLTELC EPDMQEHEEQ  60
   61 VTQHHGADET KTSSDAPTMT STETMASTPA IRKSTSANKL QGKRPPRLLI SSNNTELPAT 120
  121 HCNGRPSPVH KDIDEDSTMF GECLAFCKKN LFAEEGNEED ELVEVPEEMI MNRINCKKAT 180
  181 KSYQLGKQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [564-649]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSFQWSTGAG PRIGCVRDYP SELQFRALEE VSLSPRGTRS TRFSSPRRKP LTPNSIPVAR  60
   61 FGCSPTAQGD NMGLKPRQRC ATWTAF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle