YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|115481198, gi...
Organism: Oryza sativa Japonica Group
Length: 362 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115481198, gi....

Description E-value Query
Range
Subject
Range
gi|18542895 - gi|18542895|gb|AAL75737.1| Putative aldose 1-epimerase - like protein [Oryza sativa (japonica cultiv...
gi|37531218, gi|... - gi|37531218|ref|NP_919911.1| putative aldose 1-epimerase - like protein [Oryza sativa (japonica cult...
376.0 [0..34] [362..5]

Back

Predicted Domain #1
Region A:
Residues: [1-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCLIASSSR DKTESDFSES RQVRLAVAAM AAEEILELSN GRITAKIAAW GATITSLIVP  60
   61 DAHGNLADVV LGFDTLEPYM KGISPYFGCI VGRVANRIKE GKFTLNGVEY SLAINNGPNS 120
  121 LHGGLKGFDK VVWDVVERKS ECPSITFQYH SKDGEEGYPG DVTVRATYSL PDSTTLRLDM 180
  181 EAVAENKATP INLAQHTYWN LAGHNSGDTL DHSIQIWGKH ITPVDENTIP TGEIMPVKGT 240
  241 PFDFTTEHKI GARINDVPGG YDHNYVLDSG EEKNGLKHAA KLKDSSNSRT LDLWTDAPGM 300
  301 QFYTANYVDG VTGKGGAVYG KHSGVCLETQ GFPNAINQPN FPSVVVQPGE KYKHTMLFEF 360
  361 SA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 1snzA
Description: Crystal structure of apo human galactose mutarotase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle