YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|215686799, gi...
Organism: Oryza sativa Japonica Group
Length: 226 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215686799, gi....

Description E-value Query
Range
Subject
Range
gi|37531190, gi|... - gi|37531190|ref|NP_919897.1| putative synaptobrevin-like protein [Oryza sativa (japonica cultivar-gr...
227.0 [0..1] [226..1]

Back

Predicted Domain #1
Region A:
Residues: [1-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIVYAVVAR GTVVLAEFSA VSGNAGAVAR RILEKLPPDA ESRLCFAQDR YIFHVLRSPP  60
   61 PAAADGLTFL CMANDTFGRR IPFLYLEDIQ MRFIKNYGRI AHNALAYAMN DEFSRVLHQQ 120
  121 MEYFSSNPSA DTLNRLRGEV SEIHTVMVDN IEKILDRGER ISLLVDKTST MQDSAFHFRK 180
  181 QSRRLRRALW MKNAKLLAVL TAVIVLLLYL IIAAFCGGLS LPSCRS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.221849
Match: 2nupC
Description: No description for 2nupC was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle