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View Structure Prediction Details

Protein: gi|115486249, gi...
Organism: Oryza sativa Japonica Group
Length: 417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115486249, gi....

Description E-value Query
Range
Subject
Range
gi|4539677, gi|2... - gi|4539677|gb|AAD22170.1|AF061282_24 patatin-like protein [Sorghum bicolor], gi|242071683|ref|XP_002...
314.0 [0..7] [416..2]

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Predicted Domain #1
Region A:
Residues: [1-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASNGEATTG SETAAPAPVP EPTPPPCQGR LITVLSIDGG GIRGLIPATI LACLEAKLQE  60
   61 LDGPEARIAD YFDVIAGTST GALITSMLAA PDDDRRPLFA AGDLTNFYLE NGPKIFPQRR 120
  121 VGFLTPVANL IGVVRGPKYD GSFLHDKIKS LTHDVTISNT VTNIVVPAFD VKYLQPIIFS 180
  181 TYEAKNEPLK NAHLSDICIS TSAAPTYFPA HFFKTTDVSS GKSREFHLID GGVAANNPTM 240
  241 VAMSMISKEV LRENQDFKLG KPADYKHYLV ISIGTGTAKM AEKYTAPACA KWGVLRWLYD 300
  301 GGFTPLIDIF THASADMVDI HASVLFQSLC CEKSYLRIQD DSLEGHTSSV DIATKENMEA 360
  361 LIKIGKDLLT KRVARVNIDT GVYEPVDGEG TNEEALARFA KKLSEERRLR RNNLSSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.0
Match: 1oxwA
Description: Patatin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.15125075554295 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle