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View Structure Prediction Details

Protein: gi|77551892, gi|...
Organism: Oryza sativa Japonica Group
Length: 399 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|77551892, gi|....

Description E-value Query
Range
Subject
Range
gi|92875375 - gi|92875375|gb|ABE83368.1| Protein of unknown function DUF829, eukaryotic [Medicago truncatula]
285.0 [0..3] [399..12]

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Predicted Domain #1
Region A:
Residues: [1-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWGRQYWGGG RRPSGGGGGV VVMFAWLSSQ ERQVRAYVEL YAALGWACLV CHSEFLTLFF  60
   61 PDKAAMLADR VLAELVKELK VRPVPVVFAS FSGGPKGCTY KVLQLIERRC EGQLSLEEYQ 120
  121 LVRDCLCGQM YDSSPVDFVS DLGTRFLLHP SVLKMSQPPR ILSWMTRGIA SGLDTLFIGK 180
  181 FEAQRAEYWD TLYSSVHVGP ILIFCSEDDE LAPCSIVQKF GRRLLELGGD VNLVKWQNSP 240
  241 HVGHYKHHPE EYRAAVTELL TKASMLYM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.522879
Match: 1a8sA
Description: CHLOROPEROXIDASE F/PROPIONATE COMPLEX
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [269-399]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRRQLNSYDL GTSEHSDMLA SDVHKAGTNS NNRLRRAPDD PIDHFLLPSS MEYHESSNEE  60
   61 PKPELFNMPS VESINNPHGV LGQMLYDVCV PKNVEGWDFK PSASINGRHI NSIARQHGTF 120
  121 NPIKCIRRSK L

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle