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View Structure Prediction Details

Protein: gi|77551216, gi|...
Organism: Oryza sativa Japonica Group
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|77551216, gi|....

Description E-value Query
Range
Subject
Range
CCB1_ARATH - Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB1, chloroplastic OS=Arabidopsis thaliana GN=CCB1...
368.0 [0..7] [264..2]

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Predicted Domain #1
Region A:
Residues: [1-80]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEATAAATRL LLPPLRAPPP SLAGGAAAAA GGGGRWRGAV PRRARARRAV VPPRASLVDS  60
   61 SGGAAAAAVL LDAAVAGATG 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [81-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YSQASYYTSL GLFVLSVPGL WSLIKRSVKS KVVQKTFVKE EGQTMAPNQV AGEILSFFTR  60
   61 NNFTISDRGE VITFEGTMVP SRGQAALLTF CTCISLGSVG LVLSIAVPEG GNNWFWLMTL 120
  121 SPLAGVYYWT KASRKEEIKV KMILSDDGNV SEILVRGDDV QVEQMRKELK FSEKGMIYVK 180
  181 GIFET

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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