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View Structure Prediction Details

Protein: gi|77556254, gi|...
Organism: Oryza sativa Japonica Group
Length: 607 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|77556254, gi|....

Description E-value Query
Range
Subject
Range
gi|115489244, gi... - gi|115489244|ref|NP_001067109.1| Os12g0576600 [Oryza sativa (japonica cultivar-group)], gi|113649616...
580.0 [0..1] [607..4]

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Predicted Domain #1
Region A:
Residues: [1-64]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRLWVVATW LIVCAAAHPG EQPLSRIAVE RTVLAVNESA HVKASPWVLG LKGQNSEWVE  60
   61 VEFF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [65-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HPSPSNDDWI GVFSPANFSA AICEPENKRQ RPPVLCTAPI KYQFANFNND GYNKSGKGYL  60
   61 KLQLINQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [132-607]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 REDFSFALFS GGLLKPKLIA VSNKVAFANP KAPVYPRLAQ GKSWNEMTVT WTSGYDIKEA  60
   61 VPFVEWGAKG GRSFLSPAGT LTFDRNSMCG APARTVGWRH PGYIHTSYLK DLWPDSLYTY 120
  121 RLGHRLPNST LIWSKSYSFK ASPYPGQDSL QRVVIFGDMG KAEADGSNEF NDFQPGSLNT 180
  181 TYQIIRDLEN IDMVVHIGDI CYANGYLSQW DQFTAQIEPI ASTVPYMIGS GNHERDWPGT 240
  241 GSFYGNLDSG GECGVPAQTV FYTPAENRAK FWYATDYGMF RFCIAHTEED WRPGTEQYKF 300
  301 IEQCLSSVDR QKQPWLIFLA HRVLGYSSCS YYEEQGTFGE PMGRDTIEEL LQKYRVDLAF 360
  361 YGHVHSYERT CPVYQGQCVV NASDHYNGPF KATTHVVVGG GGASLSEFTT SKIKWSHYTD 420
  421 FDFGFVKLTA FNHSSMLFEY KKSRDGNVYD HFTISRDYRD ILACSVDNCP RTTLAT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.522879
Match: 1kbpA
Description: Purple acid phosphatase, N-terminal domain; Plant purple acid phosphatase, catalytic domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.868467185939998 bayes_pls_golite062009
hydrolase activity 0.63676719824861 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.46273977460329 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.30428003695269 bayes_pls_golite062009
phosphatase activity 0.12690085186887 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle