YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|61680510, gi\|...
Organism:	Homo sapiens
Length:	284 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|61680510, gi|....

Description	E-value	Query Range	Subject Range
gi\|73957587 - gi\|73957587\|ref\|XP_536829.2\| PREDICTED: similar to sulfatase modifying factor 2 [Canis familiaris]	310.0	[0..1]	[275..130]
SUMF2_BOVIN - Sulfatase-modifying factor 2 OS=Bos taurus GN=SUMF2 PE=2 SV=1	309.0	[0..3]	[275..29]
gi\|13544049 - gi\|13544049\|gb\|AAH06159.1\| SUMF2 protein [Homo sapiens]	297.0	[0..1]	[275..22]
gi\|109066493 - gi\|109066493\|ref\|XP_001105383.1\| PREDICTED: similar to sulfatase modifying factor 2 [Macaca mulatta]	297.0	[0..1]	[275..26]
gi\|114613487 - gi\|114613487\|ref\|XP_001160056.1\| PREDICTED: hypothetical protein isoform 7 [Pan troglodytes]	296.0	[0..1]	[275..27]
gi\|66533071 - gi\|66533071\|ref\|XP_392816.2\| PREDICTED: similar to Sulfatase-modifying factor 1 precursor (C-alpha-f...	293.0	[0..3]	[268..87]
gi\|74147446 - gi\|74147446\|dbj\|BAE38634.1\| unnamed protein product [Mus musculus]	292.0	[0..2]	[275..31]

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Predicted Domain #1

Region A:
Residues: [1-284]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATSMVQLQGG RFLMGTNSPD SRDGEGPVRE ATVKPFAIDI FPVTNKDFRD FVREKKYRTE  60
   61 AEMFGWSFVF EDFVSDELRN KATQPMKSVL WWLPVEKAFW RQPAGPGSGI RERLEHPVLH 120
  121 VSWNDARAYC AWRGKRLPTE EEWEFAARGG LKGQVYPWGN WFQPNRTNLW QGKFPKGDKA 180
  181 EDGFHGVSPV NAFPAQNNYG LYDLLGNVWE WTASPYQAAE QDMRVLRGAS WIDTADGSAN 240
  241 HRARVTTRMG NTPDSASDNL GFRCAADAGR PPGELRGSHH HHHH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	82.09691
Match:	1y4jA
Description:	Crystal structure of the paralogue of the human formylglycine generating enzyme
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	0.866564930173798	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: