YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|61679847, gi\|...
Organism:	Escherichia coli
Length:	141 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|61679847, gi|....

Description	E-value	Query Range	Subject Range
gi\|23015073 - gi\|23015073\|ref\|ZP_00054861.1\| COG1393: Arsenate reductase and related proteins, glutaredoxin family...	177.0	[0..2]	[140..7]
gi\|110336314, gi... - gi\|121593687\|ref\|YP_985583.1\| arsenate reductase [Acidovorax sp. JS42], gi\|120605767\|gb\|ABM41507.1\| ...	174.0	[0..1]	[140..1]
gi\|69933848, gi\|... - gi\|69933848\|ref\|ZP_00628984.1\| Arsenate reductase [Paracoccus denitrificans PD1222], gi\|69154195\|gb\|...	174.0	[0..3]	[141..178]
gi\|68537489, gi\|... - gi\|98977961\|gb\|ABF54112.1\| arsenate reductase [Sphingopyxis alaskensis RB2256], gi\|68537489\|ref\|ZP_0...	173.0	[0..1]	[140..1]
gi\|150958272, gi... - gi\|152973480\|ref\|YP_001338531.1\| arsenate reductase [Klebsiella pneumoniae subsp. pneumoniae MGH 785... ARSC_ACIMU - Arsenate reductase OS=Acidiphilium multivorum GN=arsC PE=3 SV=1 ARSC_ACIMA - Arsenate reductase OS=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 / AIU301) G...	173.0	[0..1]	[141..1]
gi\|83310930, gi\|... - gi\|83310930\|ref\|YP_421194.1\| arsenate reductase and related protein [Magnetospirillum magneticum AMB...	173.0	[0..2]	[140..3]
gi\|218367341, gi... - gi\|218560572\|ref\|YP_002393485.1\| arsenate reductase [Escherichia coli S88], gi\|218367341\|emb\|CAR0511... gi\|218429346, gi... - gi\|218691782\|ref\|YP_002399994.1\| arsenate reductase [Escherichia coli ED1a], gi\|218429346\|emb\|CAR103... gi\|26110552, gi\|... - gi\|26250123\|ref\|NP_756163.1\| arsenate reductase [Escherichia coli CFT073], gi\|26110552\|gb\|AAN82737.1... gi\|115514903, gi... - gi\|117625779\|ref\|YP_859102.1\| arsenate reductase [Escherichia coli APEC O1], gi\|115514903\|gb\|ABJ0297... gi\|227839530, gi... - gi\|227883651\|ref\|ZP_04001456.1\| arsenate reductase [Escherichia coli 83972], gi\|227839530\|gb\|EEJ4999... gi\|237703255, gi... - gi\|237703255\|ref\|ZP_04533736.1\| arsenate reductase ArsC [Escherichia sp. 3_2_53FAA], gi\|226902519\|gb... gi\|91074569, gi\|... - gi\|91212995\|ref\|YP_542981.1\| arsenate reductase [Escherichia coli UTI89], gi\|91074569\|gb\|ABE09450.1\|...	172.0	[0..1]	[141..1]
EG12237 - arsenate reductase / Arsenate reductase; resistance to arsenate, arsenite, and antimonite ARSC_SHIFL - Arsenate reductase OS=Shigella flexneri GN=arsC PE=3 SV=1 gi\|24053998, gi\|... - gi\|24114775\|ref\|NP_709285.1\| arsenate reductase [Shigella flexneri 2a str. 301], gi\|24053998\|gb\|AAN4... gi\|30043476, gi\|... - gi\|30065214\|ref\|NP_839385.1\| arsenate reductase [Shigella flexneri 2a str. 2457T], gi\|30043476\|gb\|AA... EG12237 - arsenate reductase / Arsenate reductase; resistance to arsenate, arsenite, and antimonite gi\|75237445, gi\|... - gi\|75237445\|ref\|ZP_00721478.1\| COG1393: Arsenate reductase and related proteins, glutaredoxin family... gi\|188492397, gi... - gi\|75516034\|ref\|ZP_00738152.1\| COG1393: Arsenate reductase and related proteins, glutaredoxin family... gi\|75179945, gi\|... - gi\|75179945\|ref\|ZP_00699932.1\| COG1393: Arsenate reductase and related proteins, glutaredoxin family... gi\|75197424, gi\|... - gi\|75197424\|ref\|ZP_00707494.1\| COG1393: Arsenate reductase and related proteins, glutaredoxin family... gi\|89110510, gi\|... - gi\|89110510\|ref\|AP_004290.1\| arsenate reductase [Escherichia coli str. K-12 substr. W3110], gi\|85676... gi\|124528579, gi... - gi\|124528579\|ref\|ZP_01699857.1\| arsenate reductase [Escherichia coli B], gi\|124500420\|gb\|EAY47893.1\|... gi\|73857577, gi\|... - gi\|74314100\|ref\|YP_312519.1\| arsenate reductase [Shigella sonnei Ss046], gi\|73857577\|gb\|AAZ90284.1\| ... gi\|81247278, gi\|... - gi\|82545867\|ref\|YP_409814.1\| arsenate reductase [Shigella boydii Sb227], gi\|81247278\|gb\|ABB67986.1\| ... gi\|169890849, gi... - gi\|170083014\|ref\|YP_001732334.1\| arsenate reductase [Escherichia coli str. K-12 substr. DH10B], gi\|1... ARSC_ECOLI - Arsenate reductase (EC 1.20.4.1) (Arsenical pump modifier) - Escherichia coli gi\|169753195, gi... - gi\|170018267\|ref\|YP_001723221.1\| arsenate reductase [Escherichia coli ATCC 8739], gi\|169753195\|gb\|AC... gi\|218362820, gi... - gi\|218556052\|ref\|YP_002388965.1\| arsenate reductase [Escherichia coli IAI1], gi\|218362820\|emb\|CAR004... gi\|238902593, gi... - gi\|238902593\|ref\|YP_002928389.1\| arsenate reductase [Escherichia coli BW2952], gi\|238860016\|gb\|ACR62... gi\|110616886, gi... - gi\|110807338\|ref\|YP_690858.1\| arsenate reductase [Shigella flexneri 5 str. 8401], gi\|110616886\|gb\|AB... gi\|251786751, gi... - gi\|251786751\|ref\|YP_003001055.1\| hypothetical protein B21_03305 [Escherichia coli BL21], gi\|24237902... gi\|83588639, gi\|... - gi\|83588639\|ref\|ZP_00927263.1\| COG1393: Arsenate reductase and related proteins, glutaredoxin family... gi\|253771667, gi... - gi\|254290176\|ref\|YP_003055924.1\| arsenate reductase [Escherichia coli BL21(DE3)], gi\|253979483\|gb\|AC... gi\|226839184, gi... - gi\|254038678\|ref\|ZP_04872734.1\| arsenate reductase [Escherichia sp. 1_1_43], gi\|226839184\|gb\|EEH7120... gi\|253975327, gi... - gi\|254163426\|ref\|YP_003046534.1\| arsenate reductase [Escherichia coli B str. REL606], gi\|253975327\|g...	172.0	[0..1]	[141..1]

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Predicted Domain #1

Region A:
Residues: [1-141]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNITIYHNP ASGTSRNTLE MIRNSGTEPT IILYLENPPS RDELVKLIAD MGISVRALLR  60
   61 KNVEPYEQLG LAEDKFTDDQ LIDFMLQHPI LINRPIVVTP LGTRLCRPSE VVLDILQDAQ 120
  121 KGAFTKEDGE KVVDEAGKRL K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	43.0
Match:	1i9dA
Description:	Arsenate reductase ArsC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
antioxidant activity	0.92550006805966	bayes_pls_golite062009
peroxidase activity	0.62384958394125	bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor	0.62384958394125	bayes_pls_golite062009
catalytic activity	0.276204095462236	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: