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View Structure Prediction Details

Protein: gi|60594092
Organism: Mus musculus
Length: 246 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|60594092.

Description E-value Query
Range
Subject
Range
gi|26338934 - gi|26338934|dbj|BAC33138.1| unnamed protein product [Mus musculus]
332.0 [0..16] [240..1]
gi|204674, gi|111839 - gi|204674|gb|AAA41357.1| inositol-1,4,5-triphosphate receptor, pir||B36579 inositol 1,4,5-triphospha...
329.0 [0..16] [240..1]
gi|73984790 - gi|73984790|ref|XP_862734.1| PREDICTED: similar to inositol 1,4,5-triphosphate receptor, type 1 isof...
328.0 [0..16] [240..1]

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Predicted Domain #1
Region A:
Residues: [1-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMTGGQQM GRGSEFSDKM SSFLHIGDIC SLYAEGSTNG FISTLGLVDD RCVVQPEAGD  60
   61 LNNPPKKFRD CLFKLCPMNR YSAQKQFWKA AKPGANSTTD AVLLNKLHHA ADLEKKQNET 120
  121 ENRKLLGTVI QYGNVIQLLH LKSNKYLTVN KRLPALLEKN AMRVTLDEAG NEGSWFYIQP 180
  181 FYKLRSIGDS VVIGDKVVLN PVNAGQPLHA SSHQLVDNPG CNEVNSVNCN TSWKIVLFLE 240
  241 HHHHHH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.69897
Match: 1xzzA
Description: Crystal structure of the ligand binding suppressor domain of type 1 inositol 1,4,5-trisphosphate receptor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle