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View Structure Prediction Details

Protein: gi|56967108, gi|...
Organism: Homo sapiens
Length: 79 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|56967108, gi|....

Description E-value Query
Range		 Subject
Range
CD3D_MACFA - T-cell surface glycoprotein CD3 delta chain OS=Macaca fascicularis GN=CD3D PE=2 SV=1
 145.0 [0..2] [79..23]
gi|109108856 - gi|109108856|ref|XP_001097302.1| PREDICTED: CD3d molecule, delta (CD3-TCR complex) [Macaca mulatta]
 145.0 [0..2] [79..23]
CD3D - CD3d molecule, delta (CD3-TCR complex)
 145.0 [0..2] [79..23]
gi|57085933 - gi|57085933|ref|XP_536556.1| PREDICTED: similar to T-cell surface glycoprotein CD3 delta chain precu...
 143.0 [0..2] [79..23]
gi|114640611 - gi|114640611|ref|XP_508789.2| PREDICTED: hypothetical protein [Pan troglodytes]
 142.0 [0..2] [79..23]
gi|74150307 - gi|74150307|dbj|BAE32208.1| unnamed protein product [Mus musculus]
 138.0 [0..2] [79..23]

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Predicted Domain #1
Region A:
Residues: [1-79] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIPIEELED RVFVNCNTSI TWVEGTVGTL LSDITRLDLG KRILDPRGIY RCNGTDIYKD  60
   61 KESTVQVHYR MCQSCVELD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.154902
Match: 1xiwB
Description: Crystal structure of human CD3-e/d dimer in complex with a UCHT1 single-chain antibody fragment
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.483195558859675 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle