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View Structure Prediction Details

Protein: TRPA_NITEU
Organism: Nitrosomonas europaea
Length: 275 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRPA_NITEU.

Description E-value Query
Range
Subject
Range
gi|186464184, gi... - gi|23128273|ref|ZP_00110124.1| COG0159: Tryptophan synthase alpha chain [Nostoc punctiforme PCC 7310...
290.0 [0..1] [275..1]

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Predicted Domain #1
Region A:
Residues: [1-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRIQSVFSQ LKSQNRAALI PFITAGDPDA TTTVALMHRL TQAGVDLIEL GVPFSDPMAD  60
   61 GPTIQRSSER ALKHHISLKD VFSMVAEFRK TNQSTPVVLM GYANPIEAMG YKDFVQTAGH 120
  121 AGVDGVLVVD YPPEECTEWV RYLKEQNIDP IFLLSPTTPE SRIRRVAELA RGYVYYVSLK 180
  181 GVTGASHLDL HEVGDKLSQL RSYINIPIGV GFGIRDEQTA RRIAEQADAV VIGSRIVEEI 240
  241 EHSPAADLLA NVGALVESLR RAIDAKSDHS SITEK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 72.522879
Match: 2ekcA
Description: No description for 2ekcA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle