YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: RL25_NITEU
Organism: Nitrosomonas europaea
Length: 198 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RL25_NITEU.

Description E-value Query
Range
Subject
Range
RL25_METFK - 50S ribosomal protein L25 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=rplY...
259.0 [0..1] [189..1]

Back

Predicted Domain #1
Region A:
Residues: [1-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIEISANSR KLHGTGANRR LRSQGRLPGV IYGGNGDAQS IELDHKDLYY KLKMEAFHAS  60
   61 ILSISIDGKK EQVLLRDVQM HPFKQQVLHI DFQRVRQDQK IHVKVPLHFI NADIAPGVKL 120
  121 SGGMISHVAT EIEISCLPKD LPEFITVDLS GMTAGSTLHL SDLILSENVE IPALLKGDNL 180
  181 PVATLIAKRG EAGESSEE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.0
Match: 1vsaT
Description: No description for 1vsaT was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle