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View Structure Prediction Details

Protein: PAP3_ORYSA
Organism: Oryza sativa
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PAP3_ORYSA.

Description E-value Query
Range
Subject
Range
gi|113640014, gi... - gi|115483624|ref|NP_001065482.1| Os10g0575700 [Oryza sativa (japonica cultivar-group)], gi|113640014...
304.0 [0..1] [374..1]

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Predicted Domain #1
Region A:
Residues: [1-285]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMPPPLFAA ASHASLLLPS PTIHSSTGSR RPFRLPLRSS RRPPVAAAAA SGVPDEWGDR  60
   61 SPSAPEPPSQ PDPPIDDDEW GRDDPSASGN SRPVLVTDEW GEPGVPEPQS TSAADPPTND 120
  121 DEWGGDPAPP PPPPPVPEED NEEERREELK RCLVDTVYGS DLGFRASSEV RGEVLELVTQ 180
  181 LEATNPTPEP VQATHLLAGN WILIYTAYSE LLPILAVGAA PLFKVDEISQ EIDTNSMTIV 240
  241 NASTISSPFA SFSFSATASF DVQSPSRIEV QFKEGSFQPP KISSS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.14
Match: 2grxC
Description: No description for 2grxC was found.

Predicted Domain #2
Region A:
Residues: [286-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDLPAEVDIF GQKISLGPVQ QVLNPLQQAF ASIAGSISGQ PPLKLPIPGN NRARSWLLTT  60
   61 YLDKDLRISR GDGGLFILVK EGSPLLDQL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle