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View Structure Prediction Details

Protein: NOL9
Organism: Homo sapiens
Length: 702 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NOL9.

Description E-value Query
Range
Subject
Range
gi|40217805, gi|... - gi|40217805|ref|NP_078930.3| nucleolar protein 9 [Homo sapiens], gi|119591956|gb|EAW71550.1| nucleol...
740.0 [0..1] [702..1]
gi|114552109 - gi|114552109|ref|XP_514340.2| PREDICTED: nucleolar protein 9 [Pan troglodytes]
731.0 [0..1] [702..1]
NOL9_MOUSE - Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Mus musculus GN=Nol9 PE=1 SV=1
686.0 [0..1] [694..1]
gi|109477749, gi... - gi|149024719|gb|EDL81216.1| nucleolar protein 9 [Rattus norvegicus], gi|109477749|ref|XP_001076353.1...
659.0 [0..1] [694..1]
gi|73956783 - gi|73956783|ref|XP_536729.2| PREDICTED: similar to K09B11.2 [Canis familiaris]
619.0 [0..1] [701..1]
NOL9_BOVIN - Polynucleotide 5'-hydroxyl-kinase NOL9 OS=Bos taurus GN=NOL9 PE=3 SV=1
564.0 [0..1] [700..1]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADSGLLLKR GSCRSTWLRV RKARPQLILS RRPRRRLGSL RWCGRRRLRW RLLQAQASGV  60
   61 DWREGARQVS RAAAARRPNT ATPSPIPSPT PASEPESEPE LESASSCHRP LLIPPVRPVG 120
  121 PGRALLLLPV EQGFTFSGIC RVTCLYGQVQ VFGFTISQGQ PAQDIFSVYT HSCLSIHALH 180
  181 YSQPEKSK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [189-584]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KELKREARNL LKSHLNLDDR RWSMQNFSPQ CSIVLLEHLK TATVNFITSY PGSSYIFVQE  60
   61 SPTPQIKPEY LALRSVGIRR EKKRKGLQLT ESTLSALEEL VNVSCEEVDG CPVILVCGSQ 120
  121 DVGKSTFNRY LINHLLNSLP CVDYLECDLG QTEFTPPGCI SLLNITEPVL GPPFTHLRTP 180
  181 QKMVYYGKPS CKNNYENYID IVKYVFSAYK RESPLIVNTM GWVSDQGLLL LIDLIRLLSP 240
  241 SHVVQFRSDH SKYMPDLTPQ YVDDMDGLYT KSKTKMRNRR FRLAAFADAL EFADEEKESP 300
  301 VEFTGHKLIG VYTDFAFRIT PRNRESHNKI LRDLSILSYL SQLQPPMPKP LSPLHSLTPY 360
  361 QVPFNAVALR ITHSDVAPTH ILYAVNASWV GLCKIQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 66.0
Match: 2j289
Description: No description for 2j289 was found.

Predicted Domain #3
Region A:
Residues: [585-702]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDVRGYTNGP ILLAQTPICD CLGFGICRGI DMEKRLYHIL TPVPPEELRT VNCLLVGAIA  60
   61 IPHCVLKCQR GIEGTVPYVT TDYNFKLPGA SEKIGAREPE EAHKEKPYRR PKFCRKMK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle