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View Structure Prediction Details

Protein: LPP_PHOLL
Organism: Photorhabdus luminescens subsp. laumondii
Length: 78 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for LPP_PHOLL.

Description E-value Query
Range
Subject
Range
gi|224964174 - gi|224964174|emb|CAX55681.1| Major outer membrane lipoprotein [Erwinia pyrifoliae]
gi|188028992, gi... - gi|188533950|ref|YP_001907747.1| Major outer membrane lipoprotein precursor (Murein-lipoprotein) [Er...
LPP_ERWAM - Major outer membrane lipoprotein OS=Erwinia amylovora GN=lpp PE=3 SV=1
111.0 [0..1] [78..1]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRTKIVLGA VVLASTLLAG CSSTAKVDQL TSDIQTLNAK VDQLSNDVNA VHTDVQAAKD  60
   61 DAARANQRLD NQVRSYKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.0
Match: 1eq7A
Description: Outer membrane lipoprotein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle