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View Structure Prediction Details

Protein: RSMG_STRP1
Organism: Streptococcus pyogenes serotype M1
Length: 237 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RSMG_STRP1.

Description E-value Query
Range
Subject
Range
RSMG_STRPC - Ribosomal RNA small subunit methyltransferase G OS=Streptococcus pyogenes serotype M12 (strain MGAS9...
217.0 [0..1] [237..1]

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Predicted Domain #1
Region A:
Residues: [1-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPQDFYRTL EEDGFSLSSK QKEQFDTYFK SLVEWNTKIN LTAITEENEV YLKHFYDSIA  60
   61 PILQGFLANE PIKLLDIGAG AGFPSLPMKI LFPNLEVTII DSLNKRISFL TLLAQELGLE 120
  121 NVHFFHGRAE DFGQDKAFRG QFDVVTARAV ARMQVLSELT IPFLKIGGKL IALKAQAADQ 180
  181 ELEEAKNALC LLFGKVIKNH SYQLPNGDSR FITIVEKKKE TPNKYPRKAG LPNKKPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.0
Match: 1xdzA
Description: Crystal Structure of Gram_Positive Bacillus subtilis Glucose inhibited Division protein B (gidB), Structural genomics, MCSG
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.62377578202456 bayes_pls_golite062009
transferase activity 1.20063885869845 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 1.05991383541555 bayes_pls_golite062009
methyltransferase activity 1.04943568976829 bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity 0.414568039011584 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle