YRC Public Data Repository - Protein Structure Prediction

Protein:	FABZ_GEOKA
Organism:	Geobacillus kaustophilus
Length:	145 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FABZ_GEOKA.

Description	E-value	Query Range	Subject Range
gi\|89095668, gi\|... - gi\|89095668\|ref\|ZP_01168562.1\| (3R)-hydroxymyristoyl ACP dehydratase [Bacillus sp. NRRL B-14911], gi...	186.0	[0..1]	[143..1]
gi\|90413540, gi\|... - gi\|90413540\|ref\|ZP_01221531.1\| (3R)-hydroxymyristoyl ACP dehydratase [Photobacterium profundum 3TCK]...	184.0	[0..2]	[141..8]
FABZ_PHOPR - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Photobacterium profundum GN=fabZ PE=3 SV=1 FABZ_PHOPR - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Photobacterium profundum (strain SS9) GN=fa...	183.0	[0..2]	[141..8]
FABZ_ROSS1 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Roseiflexus sp. (strain RS-1) GN=fabZ PE=3 ...	183.0	[0..1]	[142..1]
gi\|213969129, gi... - gi\|213969129\|ref\|ZP_03397268.1\| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Pseudomona... FABZ_PSESM - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. tomato (strain DC3... FABZ_PSESM - (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase OS=Pseudomonas syringae pv. tomato GN=fabZ ...	183.0	[0..1]	[141..1]
gi\|114770497 - gi\|114770497\|ref\|ZP_01447987.1\| (3R)-hydroxymyristol acyl carrier protein dehydratase [alpha proteob... gi\|221133304 - gi\|221133304\|ref\|ZP_03559609.1\| 3-hydroxymyristol acyl carrier protein dehydratase [Glaciecola sp. H... gi\|114548678, gi... - gi\|114770497\|ref\|ZP_01447987.1\| (3R)-hydroxymyristol acyl carrier protein dehydratase [alpha proteob...	183.0	[0..2]	[141..8]
gi\|91795797, gi\|... - gi\|92112707\|ref\|YP_572635.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Chromohalobacter salexigens DSM ...	182.0	[0..1]	[141..2]
FABZ_PSEU2 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. syringae (strain B... FABZ_PSE14 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas savastanoi pv. phaseolicola (st... tr\|F3G1L3\|F3G1L3... - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ OS=Pseudomonas syringae pv. pisi str. 1704B GN... gi\|237800154 - gi\|237800154\|ref\|ZP_04588615.1\| (3R)-hydroxymyristoyl-ACP dehydratase [Pseudomonas syringae pv. oryz...	182.0	[0..1]	[141..1]
gi\|110341272, gi... - gi\|110597081\|ref\|ZP_01385370.1\| beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ [Chlorobium...	182.0	[0..1]	[144..323]
gi\|194308259, gi... - gi\|68549801\|ref\|ZP_00589260.1\| UDP-3-0-acyl N-acetylglucosamine deacetylase:Beta-hydroxyacyl-(acyl-c...	181.0	[0..1]	[144..323]

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Predicted Domain #1

Region A:
Residues: [1-145]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDIQQIQSI IPHRYPFLLV DRILEIEEGK RAVGIKNVSA NESFFAGHFP EYPVMPGVLI  60
   61 VEALAQVGAV VLLQSEENRG RLAFFAGIDN CRFKKQVKPG DQLRLEVEIL RARGAIGKGK 120
  121 GIATVDGELV CETELMFALG DKRAD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	45.69897
Match:	1u1zA
Description:	The Structure of (3R)-hydroxyacyl-ACP dehydratase (FabZ)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits