YRC Public Data Repository - Protein Structure Prediction

Protein:	DEOD_BACHK
Organism:	Bacillus thuringiensis serovar konkukian
Length:	235 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DEOD_BACHK.

Description	E-value	Query Range	Subject Range
gi\|242258488, gi... - gi\|242258488\|ref\|ZP_04803284.1\| purine nucleoside phosphorylase [Thermoanaerobacter sp. X513], gi\|24... gi\|241902447, gi... - gi\|241902447\|ref\|ZP_04787181.1\| purine nucleoside phosphorylase [Thermoanaerobacter brockii subsp. f... DEOD_THEPX - Purine nucleoside phosphorylase DeoD-type OS=Thermoanaerobacter sp. (strain X514) GN=deoD PE=3 SV=1 DEOD_THEP3 - Purine nucleoside phosphorylase DeoD-type OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 ...	5.0E-62	[1..232]	[1..232]
gi\|228900142, gi... - gi\|228900142\|ref\|ZP_04064375.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis IBL 4222], g... gi\|75761466, gi\|... - gi\|75761466\|ref\|ZP_00741432.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis serovar israe...	9.0E-62	[1..235]	[1..235]
DEOD_THETN - Purine nucleoside phosphorylase deoD-type OS=Thermoanaerobacter tengcongensis GN=deoD PE=3 SV=1 DEOD_CALS4 - Purine nucleoside phosphorylase DeoD-type OS=Caldanaerobacter subterraneus subsp. tengcongensis (str...	1.0E-61	[1..232]	[1..232]
gi\|228750541, gi... - gi\|229010867\|ref\|ZP_04168064.1\| Purine nucleoside phosphorylase [Bacillus mycoides DSM 2048], gi\|228... gi\|229074755, gi... - gi\|229074755\|ref\|ZP_04207774.1\| Purine nucleoside phosphorylase [Bacillus cereus Rock4-18], gi\|22870... gi\|229115010, gi... - gi\|229115010\|ref\|ZP_04244421.1\| Purine nucleoside phosphorylase [Bacillus cereus Rock1-3], gi\|228668... gi\|228651075, gi... - gi\|229132369\|ref\|ZP_04261223.1\| Purine nucleoside phosphorylase [Bacillus cereus BDRD-ST196], gi\|228... gi\|229096054, gi... - gi\|229096054\|ref\|ZP_04227028.1\| Purine nucleoside phosphorylase [Bacillus cereus Rock3-29], gi\|22868... DEOD_BACCZ - Purine nucleoside phosphorylase DeoD-type OS=Bacillus cereus (strain ZK / E33L) GN=deoD PE=3 SV=1 gi\|229102166, gi... - gi\|229102166\|ref\|ZP_04232876.1\| Purine nucleoside phosphorylase [Bacillus cereus Rock3-28], gi\|22868... gi\|229166405, gi... - gi\|229166405\|ref\|ZP_04294161.1\| Purine nucleoside phosphorylase [Bacillus cereus AH621], gi\|22861697...	2.0E-61	[1..235]	[1..235]
DEOD_XENNA - Purine nucleoside phosphorylase DeoD-type OS=Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 /... DEOD_XENNE - Purine nucleoside phosphorylase deoD-type OS=Xenorhabdus nematophilus GN=deoD PE=3 SV=1	2.0E-61	[2..233]	[3..234]
DEOD_BACCN - Purine nucleoside phosphorylase DeoD-type OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 3...	2.0E-61	[1..235]	[1..235]
gi\|228775036, gi... - gi\|228984642\|ref\|ZP_04144815.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis serovar toch... DEOD_BACCR - Purine nucleoside phosphorylase DeoD-type OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 ... gi\|229043304, gi... - gi\|229043304\|ref\|ZP_04191024.1\| Purine nucleoside phosphorylase [Bacillus cereus AH676], gi\|22872601... gi\|228801754, gi... - gi\|228957838\|ref\|ZP_04119578.1\| Purine nucleoside phosphorylase [Bacillus thuringiensis serovar paki... gi\|228639170, gi... - gi\|229144162\|ref\|ZP_04272576.1\| Purine nucleoside phosphorylase [Bacillus cereus BDRD-ST24], gi\|2286... gi\|228628257, gi... - gi\|229155130\|ref\|ZP_04283242.1\| Purine nucleoside phosphorylase [Bacillus cereus ATCC 4342], gi\|2286... gi\|228674487, gi... - gi\|229109018\|ref\|ZP_04238619.1\| Purine nucleoside phosphorylase [Bacillus cereus Rock1-15], gi\|22867... gi\|228656817, gi... - gi\|229126877\|ref\|ZP_04255889.1\| Purine nucleoside phosphorylase [Bacillus cereus BDRD-Cer4], gi\|2286...	3.0E-61	[1..235]	[1..235]
DEOD_BACCE - Purine nucleoside phosphorylase deoD-type OS=Bacillus cereus GN=deoD PE=3 SV=1	3.0E-61	[1..235]	[1..235]
DEOD_PHOLL - Purine nucleoside phosphorylase deoD-type OS=Photorhabdus luminescens subsp. laumondii GN=deoD PE=3 ... DEOD_PHOLL - Purine nucleoside phosphorylase DeoD-type OS=Photorhabdus luminescens subsp. laumondii (strain DSM 1...	4.0E-61	[2..233]	[3..234]
gi\|168216787, gi... - gi\|182381112\|gb\|EDT78591.1\| purine nucleoside phosphorylase [Clostridium perfringens NCTC 8239], gi\|... gi\|170662200, gi... - gi\|170662200\|gb\|EDT14883.1\| purine nucleoside phosphorylase [Clostridium perfringens E str. JGS1987]... DEOD_CLOPS - Purine nucleoside phosphorylase DeoD-type OS=Clostridium perfringens (strain SM101 / Type A) GN=deoD... gi\|182626457, gi... - gi\|182626457\|ref\|ZP_02954209.1\| putative membrane protein [Clostridium perfringens D str. JGS1721], ... gi\|169347265, gi... - gi\|169347265\|ref\|ZP_02866204.1\| purine nucleoside phosphorylase [Clostridium perfringens C str. JGS1... gi\|18310380, gi\|... - gi\|18310380\|ref\|NP_562314.1\| purine nucleoside phosphorylase [Clostridium perfringens str. 13], gi\|1...	1.0E-60	[1..233]	[1..233]

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Predicted Domain #1

Region A:
Residues: [1-235]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVHIEAKQG EIAESILLPG DPLRAKYIAE TFLEDVTCYN NVRGMLGFTG TYKGKRVSVQ  60
   61 GTGMGVPSIS IYVNELIQSY GVKNLIRVGT CGAIQKDVKV RDVIIAMTAC TDSNMNRLTF 120
  121 PGFDFAPAAN FDLLKKAYDA GTEKGLHVRV GNVLTADVFY RESMDMVKKL GDYGVLAVEM 180
  181 ETTALYTLAA KYGVNALSVL TVSDHIFTGE ETTSEERQTT FNEMIEIALD AAIQQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	63.0
Match:	2ac7A
Description:	No description for 2ac7A was found.

Predicted functions:

Term	Confidence	Notes
purine-nucleoside phosphorylase activity	3.68206997938506	bayes_pls_golite062009
transferase activity, transferring glycosyl groups	3.66765825367784	bayes_pls_golite062009
catalytic activity	2.18268586151113	bayes_pls_golite062009
transferase activity, transferring pentosyl groups	2.01261001022129	bayes_pls_golite062009
S-methyl-5-thioadenosine phosphorylase activity	1.6959166270803	bayes_pls_golite062009
transferase activity	1.42022417161912	bayes_pls_golite062009
nucleobase binding	1.33291775180025	bayes_pls_golite062009
nucleoside binding	1.11256863177576	bayes_pls_golite062009
purine binding	1.00226077276304	bayes_pls_golite062009
binding	0.192121943858605	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: