YRC Public Data Repository - Protein Structure Prediction

Protein:	DAD3_KLULA
Organism:	Kluyveromyces lactis
Length:	85 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD3_KLULA.

Description	E-value	Query Range	Subject Range
gi\|39978223, gi\|... - gi\|39978223\|ref\|XP_370499.1\| hypothetical protein MG06996.4 [Magnaporthe grisea 70-15], gb\|EAA55339....	110.0	[0..3]	[77..55]
gi\|114195380, gi... - gi\|115387581\|ref\|XP_001211296.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	105.0	[0..5]	[80..89]
gi\|169775255 - gi\|169775255\|ref\|XP_001822095.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83769958 - gi\|83769958\|dbj\|BAE60093.1\| unnamed protein product [Aspergillus oryzae]	101.0	[0..5]	[77..26]
gi\|46107530, gi\|... - gi\|46107530\|ref\|XP_380824.1\| hypothetical protein FG00648.1 [Gibberella zeae PH-1], gi\|42545535\|gb\|E...	99.0	[0..4]	[77..14]
gi\|67515723, gi\|... - gi\|67515723\|ref\|XP_657747.1\| hypothetical protein AN0143.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	96.0	[0..5]	[76..38]
DAD3_ASHGO - DASH complex subunit DAD3 OS=Ashbya gossypii GN=DAD3 PE=3 SV=1 DAD3_ASHGO - DASH complex subunit DAD3 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-10...	95.0	[0..1]	[82..1]
DAD3_CANAL - DASH complex subunit DAD2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DAD3 PE=3 SV=1 DAD3_CANAL - DASH complex subunit DAD2 OS=Candida albicans GN=DAD3 PE=3 SV=1	95.0	[0..2]	[85..22]
gi\|85080092 - gi\|85080092\|ref\|XP_956477.1\| hypothetical protein NCU01799 [Neurospora crassa OR74A] gi\|28917543, gi\|... - gi\|32415517\|ref\|XP_328238.1\| predicted protein [Neurospora crassa], gi\|28917543\|gb\|EAA27241.1\| conse...	92.0	[0..4]	[77..16]
gi\|169623494, gi... - gi\|169623494\|ref\|XP_001805154.1\| hypothetical protein SNOG_14989 [Phaeosphaeria nodorum SN15], gi\|11...	89.0	[0..2]	[79..19]

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Predicted Domain #1

Region A:
Residues: [1-85]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSELTPLQR SVLDKYRFLA ESLRELSETL SDLNNTHEDS KPEAILQEMR EIEVKISLVS  60
   61 TLLKGSVYSL VIQRRMDHQQ KPSDL

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	45.552842
Match:	PF08656.1
Description:	No description for PF08656.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.955	0.060	microtubule	a.24.3	Cytochromes

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits