YRC Public Data Repository - Protein Structure Prediction

Protein:	DAD1_KLULA
Organism:	Kluyveromyces lactis
Length:	95 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DAD1_KLULA.

Description	E-value	Query Range	Subject Range
DAD1_ASHGO - DASH complex subunit DAD1 OS=Ashbya gossypii GN=DAD1 PE=3 SV=1 DAD1_ASHGO - DASH complex subunit DAD1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-10...	122.0	[0..7]	[93..12]
gi\|114192175, gi... - gi\|115399406\|ref\|XP_001215292.1\| predicted protein [Aspergillus terreus NIH2624], gi\|114192175\|gb\|EA...	119.0	[0..1]	[89..3]
gi\|83773045 - gi\|83773045\|dbj\|BAE63173.1\| unnamed protein product [Aspergillus oryzae] gi\|169779683 - gi\|169779683\|ref\|XP_001824306.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|238500355, gi... - gi\|238500355\|ref\|XP_002381412.1\| DASH complex subunit DAD1, putative [Aspergillus flavus NRRL3357], ...	111.0	[0..1]	[84..3]
gi\|42545872, gi\|... - gi\|46105394\|ref\|XP_380501.1\| hypothetical protein FG00325.1 [Gibberella zeae PH-1], gi\|42545872\|gb\|E...	107.0	[0..13]	[89..17]
gi\|57227377, gi\|... - gi\|58267974\|ref\|XP_571143.1\| hypothetical protein CNE04540 [Cryptococcus neoformans var. neoformans ... gi\|50257833, gi\|... - gi\|50257833\|gb\|EAL20534.1\| hypothetical protein CNBE4540 [Cryptococcus neoformans var. neoformans B-...	101.0	[0..8]	[84..13]
gi\|111062680 - gi\|111062680\|gb\|EAT83800.1\| hypothetical protein SNOG_08632 [Phaeosphaeria nodorum SN15]	98.0	[0..13]	[88..19]
gi\|66850886, gi\|... - gi\|70996991\|ref\|XP_753250.1\| conserved hypothetical protein [Aspergillus fumigatus Af293], gi\|668508...	97.0	[0..8]	[88..6]
gi\|190405009 - gi\|190405009\|gb\|EDV08276.1\| DASH complex subunit DAD1 [Saccharomyces cerevisiae RM11-1a] DAD1 - Essential subunit of the Dam1 complex (aka DASH complex), couples kinetochores to the force produced... gi\|151942004 - gi\|151942004\|gb\|EDN60360.1\| duo1 and dam1 interacting protein [Saccharomyces cerevisiae YJM789] DAD1_YEAST - DASH complex subunit DAD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAD1 PE=1 SV=1	97.0	[0..3]	[74..8]
gi\|18376377, gi\|... - gi\|32404100\|ref\|XP_322663.1\| predicted protein [Neurospora crassa], gi\|28917931\|gb\|EAA27616.1\| predi... gi\|85082116 - gi\|85082116\|ref\|XP_956852.1\| hypothetical protein NCU03405 [Neurospora crassa OR74A]	94.0	[0..13]	[74..19]
gi\|119191756, gi... - gi\|90305270\|gb\|EAS34901.1\| predicted protein [Coccidioides immitis RS], gi\|119191756\|ref\|XP_00124648...	94.0	[0..14]	[86..12]

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Predicted Domain #1

Region A:
Residues: [1-95]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEEVQQLST GDKYFIEQRS LILQEINESM DAILNQLNGL NITLENSIAV GKEFENVSQI  60
   61 WKLFYNGLES EEQNMETVGV ADSEHITEDV NPEGK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	33.638272
Match:	PF08649.1
Description:	No description for PF08649.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.703	0.872	chromosome segregation	a.4.5	"Winged helix" DNA-binding domain

Predicted functions:

Term	Confidence	Notes
binding	0.176785234010313	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: