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View Structure Prediction Details

Protein: COBT_LEPIC
Organism: Leptospira interrogans serovar Copenhageni
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COBT_LEPIC.

Description E-value Query
Range
Subject
Range
COBT_LEPIN - Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase OS=Leptospira interrogans GN=...
COBT_LEPIN - Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase OS=Leptospira interrogans ser...
464.0 [0..1] [344..1]

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Predicted Domain #1
Region A:
Residues: [1-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPDQLSTKL QNKIDLKTKP PGSLGTLESI ALQIGLIQNT DSPELKNPHI LVFAGDHGLA  60
   61 ESGVSAFPKE VTHQMVFNFL NGGAAINAFC KQNSIRLKVV DSGVDFKFPH DTVSLHPDFI 120
  121 DAKVGFGTKN ILIEPAMTKE QCNQALENGA RISQKSVSEN CNVIGFGEMG IGNTSSASLI 180
  181 TASILKKSLK EVTGKGTGLN DQGFQKKIEI LEKCFEKHKT NLKTAFDVLQ TFGGFEIAMM 240
  241 VGAMIDSVKK GRIILIDGFI ATSAFLIAHK MEPSILKNAV FCHKSVEPGH SYLLEEWNIK 300
  301 PLLDLGLRLG EGTGCAIAFP ILISAVTFLK EMASFESAKV DQKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.522879
Match: 1wx1A
Description: Crystal structure of nictinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase from Thermus thermophilus HB8
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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