YRC Public Data Repository - Protein Structure Prediction

Protein:	CG4822-PG
Organism:	Drosophila melanogaster
Length:	144 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4822-PG.

Description	E-value	Query Range	Subject Range
gi\|146297202, gi... - gi\|82500846\|ref\|ZP_00886240.1\| ATPas [Caldicellulosiruptor saccharolyticus DSM 8903], gi\|82401164\|gb...	169.0	[0..1]	[144..303]
gi\|24346291, gi\|... - gi\|24372343\|ref\|NP_716385.1\| ABC transporter, ATP-binding protein [Shewanella oneidensis MR-1], gi\|2... SO0754 - ABC transporter ATP-binding protein	160.0	[0..1]	[144..301]
gi\|78510637, gi\|... - gi\|78689984\|ref\|ZP_00854638.1\| ATPas [Shewanella sp. MR-7], gi\|78510637\|gb\|EAP24005.1\| ATPas [Shewan...	160.0	[0..1]	[144..301]
gi\|113971686, gi... - gi\|82494839\|ref\|ZP_00880418.1\| ATPas [Shewanella sp. MR-4], gi\|82407083\|gb\|EAP47744.1\| ATPas [Shewan...	159.0	[0..1]	[144..301]
gi\|221230024, gi... - gi\|221230024\|ref\|YP_002503440.1\| putative ABC transporter, ATP-binding component [Mycobacterium lepr... gi\|15827547 - gi\|15827547\|ref\|NP_301810.1\| ABC transporter ATP-binding protein [Mycobacterium leprae TN] gi\|25307351, gi\|... - pir\|\|C87048 probable ABC transporter, ATP-binding component ML1113 [imported] - Mycobacterium leprae...	159.0	[0..1]	[144..337]
gi\|74005769 - gi\|74005769\|ref\|XP_536073.2\| PREDICTED: similar to ATP-binding cassette, sub-family B, member 6, mit...	159.0	[0..1]	[144..796]
gi\|11245444 - gi\|11245444\|gb\|AAG33617.1\|AF308472_1 ATP-binding cassette half-transporter [Homo sapiens]	159.0	[0..1]	[144..591]
gi\|114583409 - gi\|114583409\|ref\|XP_001161097.1\| PREDICTED: ATP-binding cassette, sub-family B, member 6 isoform 5 [...	158.0	[0..1]	[144..537]

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Predicted Domain #1

Region A:
Residues: [1-144]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METASSVKGS TTSQISSLQY SSDINADSLE PDQSEDFQTV LGLKYLPSWP AVNLQFSELC  60
   61 YVVPDQTNAS KTKTILRRVN GMFHSHELTA IIGPSGAGKT TLLNLLAGFG AVCESGEILV 120
  121 NNSPRDMRVF RKMSRYIMQV KVDY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.0
Match:	2hydA
Description:	No description for 2hydA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits