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View Structure Prediction Details

Protein: CE38672
Organism: Caenorhabditis elegans
Length: 312 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38672.

Description E-value Query
Range
Subject
Range
gi|73964763 - gi|73964763|ref|XP_848726.1| PREDICTED: similar to Ca2+-dependent endoplasmic reticulum nucleoside d...
491.0 [0..4] [305..106]

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Predicted Domain #1
Region A:
Residues: [1-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLPLAIITD MDSKTKQKDS WYSTLRYGAL AFSQNRTASF IHWLGGVNIT SNFNFNQKSM  60
   61 EMSDLKIFNN RLLSVDDKIG VVYWLRNGTA IPWVISSTGN GSSSSPFKGE WMTIRNNKLY 120
  121 LGSSGHELRT FTGEYLNDDE MYIRVISGNG GMRVEDWISR FVKLRRAVGI SFPGYMIHEA 180
  181 VHWSDVHKKW FFLPRYASKE PYNAATAYET GVNMLLSTSD CFCDTKVVYI GKHKPQRGFS 240
  241 AFQFIPGTND EIIVALKTSE VPADPTKPFV NKIFSTWITI FKIDGTVILE DQALEDGVKY 300
  301 EGIEFANVFQ CL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 138.0
Match: 2h2uA
Description: No description for 2h2uA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle