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View Structure Prediction Details

Protein: atg-5
Organism: Caenorhabditis elegans
Length: 163 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for atg-5.

Description E-value Query
Range
Subject
Range
gi|109072205 - gi|109072205|ref|XP_001087825.1| PREDICTED: ATG5 autophagy related 5 homolog (S. cerevisiae) isoform...
253.0 [0..2] [163..4]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYEVCRKVW ESHVPCQFTL QSSGGTHGEP LPFYTMLPRF SYLALAIQKV LSSFNRRDDG  60
   61 EKVHSDKMWL EHNGIPLKMY IPIGVIYDQA NLSENDSILE IIVRTSQPPP QFQMVDRDMM 120
  121 EAMFMQNIKE ADYLKTKAEI TKNMMKDESA QLWRSVCNSM GVF

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Detection Method: PSI-BLAST
Confidence: 36.221849
Match: 2dymA
Description: No description for 2dymA was found.

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Created and Maintained by: Michael Riffle