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View Structure Prediction Details

Protein: CE39059
Organism: Caenorhabditis elegans
Length: 474 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE39059.

Description E-value Query
Range
Subject
Range
gi|109017747 - gi|109017747|ref|XP_001117782.1| PREDICTED: ubiquitin-specific protease 21 isoform 7 [Macaca mulatta...
232.0 [0..2] [469..156]

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Predicted Domain #1
Region A:
Residues: [1-474]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLRGYSPQT IVAGTLIGGT LAAAVTYAFL TSRNGEEASS SRLVPGLANQ GNTCYMNALL  60
   61 QGLASCPSFV GWLKSLKPQD IGIQGGFVDH LSNLLHLLNE PTGSTLTAQS IVESLKAHGW 120
  121 SITVGVEHDL YELFNVFVTT WEDELKSSRR ILMNQSIENC HSSSSEDDED VVVESTSLRG 180
  181 SPSIIRKLMS FQRCASMARI DASLRSPCVG LTATEYRCCN TNCGYRTVKY ESFTVLTLAI 240
  241 PNSQMGTSTN TESLLRRFFC SEIIRDAICD KCRASDRKQQ GFLKKHGIVK LPQTLMIRIE 300
  301 RVGMLPNGSM KLSEHVHFGE CLSLQDVCFR KNPKINQKSY EESSLHWQLP DGTSRVVGGA 360
  361 EETRSRRSPI HPSQAAIFGD LASNYALIDG GSFVAERREA QKYAYQLRAV SEHRGGPYSG 420
  421 HFVTYRRASA PNHHTWYYTS DAQVTRVPYS HVAACQSYML FYERVKPHRL YERM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.221849
Match: 2ibiA
Description: No description for 2ibiA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle