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View Structure Prediction Details

Protein: catp-7
Organism: Caenorhabditis elegans
Length: 703 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for catp-7.

Description E-value Query
Range
Subject
Range
gi|114558784 - gi|114558784|ref|XP_513679.2| PREDICTED: hypothetical protein [Pan troglodytes]
470.0 [0..1] [701..426]

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Predicted Domain #1
Region A:
Residues: [1-703]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTSFILFYR GSSIGKIIIR ALDLVTIVVP PALPAVMGIG IFYAQRRLRQ KSIYCISPTT  60
   61 INTCGAIDVV CFDKTGTLTE DGLDFYALRV VNDAKIGDNI VQIAANDSCQ NVVRAIATCH 120
  121 TLSKINNELH GDPLDVIMFE QTGYSLEEDD SESHESIESI QPILIRPPKD SSLPDCQIVK 180
  181 QFTFSSGLQR QSVIVTEEDS MKAYCKGSPE MIMSLCRPET VPENFHDIVE EYSQHGYRLI 240
  241 AVAEKELVVG SEVQKTPRQS IECDLTLIGL VALENRLKPV TTEVIQKLNE ANIRSVMVTG 300
  301 DNLLTALSVA RECGIIVPNK SAYLIEHENG VVDRRGRTVL TIREKEDHHT ERQPKIVDLT 360
  361 KMTNKDCQFA ISGSTFSVVT HEYPDLLDQL VLVCNVFARM APEQKQLLVE HLQDVGQTVA 420
  421 MCGDGANDCA ALKAAHAGIS LSEAEASIAA PFTSKVADIR CVITLISEGR AALVTSYSAF 480
  481 LCMAGYSLTQ FISILLLYWI ATSYSQMQFL FIDIAIVTNL AFLSSKTRAH KELASTPPPT 540
  541 SILSTASMVS LFGQLAIGGM AQVAVFCLIT MQSWFIPFMP THHDNDEDRK SLQGTAIFYV 600
  601 SLFHYIVLYF VFAAGPPYRA SIASNKAFLI SMIGVTVTCI AIVVFYVTPI QYFLGCLQMP 660
  661 QEFRFIILAV ATVTAVISII YDRCVDWISE RLREKIRQRR KGA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 1iwoA
Description: Calcium ATPase, transduction domain A; Calcium ATPase, catalytic domain P; Calcium ATPase; Calcium ATPase, transmembrane domain M
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle