YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: acdh-11
Organism: Caenorhabditis elegans
Length: 608 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acdh-11.

Description E-value Query
Range
Subject
Range
gi|194562427, gi... - gi|84362930|ref|ZP_00987541.1| COG1960: Acyl-CoA dehydrogenases [Burkholderia dolosa AUO158], gi|254...
477.0 [0..28] [601..4]

Back

Predicted Domain #1
Region A:
Residues: [1-608]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSANAT ITARHTQYSH AKTGGFSQTG PTLHNPYKDD PILDRTLRRL LPESEYMRVA  60
   61 ADLSKFGDRI TSEVEHLGRQ AELEQPRLEH QDAWGKRVDK LIVCNEWHKL KQICAEEGVI 120
  121 SIGYEDSVDP FVRRIHQVAK LFLFSPSAGL VSCPMAMTDG AVKTLTSLNL YGKHKLATEA 180
  181 VDRLRSRDPS KAWTSGQWMT EKKGGSDVAG GCDTYAVQID KDTYRLHGYK WFSSAVDADV 240
  241 ALTLARIVDS DGNALEGSRG LSLFLLKIRD ESGNLNGIQM VRLKNKLGTK QLPTAELLLD 300
  301 GAIAERIGDQ GRGVAGISNM LNITRIHNAV ASLGYMRRII SLARDYSTKR VVFGQTQSKW 360
  361 PLHTTTLAKM EVDTRGSMLL LFEAARLLGL SEAGKSSDVE AMMLRLITPV LKLYAGKQAV 420
  421 PMVSEGIECF GGQGYMEDTG LPTLLRDAQV TPIWEGTTNV LSLDVLRVFS GKENILLAFG 480
  481 KRVEQLLGNT KTEDEKLKKS KEAVESALKQ LQKLLVKASD SAIQGETRID SVARHIAFTI 540
  541 ARIYSGALLI DHASDSSVAN QSDIEVAYRY CCEQPLIDLR WEWFASERVK ADREIVFDNF 600
  601 TALEKSKI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.0
Match: 2uxwA
Description: No description for 2uxwA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle