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View Structure Prediction Details

Protein: CE38563
Organism: Caenorhabditis elegans
Length: 277 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38563.

Description E-value Query
Range
Subject
Range
CE38564 - status:Partially_confirmed UniProt:Q2Z1N6 protein_id:AAX88818.1
255.0 [0..1] [269..1]

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Predicted Domain #1
Region A:
Residues: [1-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLNFQNFDN VNSTNEQSGA FGGNIGDRNI LVGGSVGATS SAAPSGGVFD DSQSTTSTRK  60
   61 GNFFSFEYYQ QFFDVETDQV IKRLLNSVIP THRNYIQDFL QPIPDLWGPF WVSVTLVFAI 120
  121 GIFGNLAQFI ENDGAKGTYG SDFRMVTSAS TLIFLYVVIV PLLLYGLLWN RRSELLHPYV 180
  181 DLVCLYGYSL AIFIPVSVLW IVDIGWFRWA LIFASVGLSG TVLARAIWPA VQNDNNKMIA 240
  241 FGTVISVVVL HFLLAFTFKV YFFDSMHIVV VASPSPI

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 61.443697
Match: PF04893.8
Description: No description for PF04893.8 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle