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View Structure Prediction Details

Protein: CE38741
Organism: Caenorhabditis elegans
Length: 345 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38741.

Description E-value Query
Range
Subject
Range
CE13225 - WBGene00020255 status:Predicted TR:O16300 protein_id:AAB65360.1
282.0 [0..135] [345..721]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTHCGPFHCV PARSFSNFTR DLVFVIPCER LVALIKNVLY KVLGKQVVTI LELETLVIET  60
   61 EGIINSRPIT PNKKDPDDAP AIRPADFISY NAQLTRPEHH KSIFEAIQGG ESGKLTRQLM 120
  121 EKLRIIKEQL WKEFSKSYIA ALRDV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [146-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EHHKKATSRL KPEIGQVVLV FQKLLPRYAW PMARIVELNR KNPDGEVQSV MVKMGKRIVE  60
   61 KPVNLLIPLE NTGI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [220-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RIQVAQEEEG PDDDVAVEDV DAADEQEAGT AKNPEEDIPK EGAVTEEQDV NVDKDPEEER  60
   61 EDGRAHLKRA AKTRPLRIPA KFREFSFPGV SRRTALREGK KEEIDNRVRR SAFASTEMRQ 120
  121 NVRFKY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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