| Protein: | ptr-17 |
| Organism: | Caenorhabditis elegans |
| Length: | 797 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ptr-17.
| Description | E-value | Query Range |
Subject Range |
|
|
431.0 | [0..44] | [771..451] |
|
Region A: Residues: [1-797] |
1 11 21 31 41 51
| | | | | |
1 MIISKIRAAP LEQPWANIVA KYCLFVAKYP WPFIIIPLII TICLSMGIIL NFKIVRGVNY 60
61 LYAPLNATWK TEEAVFGENW AKDDDHFYPG KDILRRQGIY LIVNAKDGGN VLRQEYAQDF 120
121 LKILDWILNV KLLSSAGRIF TYKDVCLHFQ NDCFSNPHAK LLANIYSKNH QNSMFNITYP 180
181 IYRSTYATEP IDISKVLGNV SLDYDGHVEN ASAWLILYQL KNEKWQLSRD FEDGLAEKIQ 240
241 SGEAPSELLN LYYFHSATFD QELEKENRRL TPKFSITFSV LIIFAIMTTF TIKFMKFKTE 300
301 NGINQYPVID WVLSKPLLGI CGVLVTMCAI ISSTGLLMLF NVTFVDMCTV MPFLSLTIGI 360
361 DDTFLMLAAW HETDRNLPYE KRIEKAMRHA AVSISITSLT DALAFLIGSI APLPAVIYFC 420
421 YYSSAAILFI FLYVLTMFVA VLALQGRREE DLKHSVTGMK TIDLDSDYET ASTRQLLLKM 480
481 GSRVSVKADE ENNNNNNEKS IENIQKIDNR MWYQRFFEDQ YAPFISNSKI SILSFLIYLA 540
541 YLAAAFYGVK HLKIGFDFVV TVVLTIKYKV LQLINIVQED SASRVFLEVR EQLFPEDTKL 600
601 MDIAVMNSPN FSNPEERFNF MEVLSEFEST WCSEGRESTQ FWFFEMQKYL SNLGFGGDLT 660
661 KTMNSERKLS QSKKTFLMSH EKFGYDVLSD KQFRLSTRLK NVETDEEMFN CARTMRKLSQ 720
721 KHANYSIITY SPLWNIADEY DIMWPQTMQD IYISIAVMVP VALLFIPQPL CSVIIGEFCR 780
781 IRSICSLRCL CSQTSQA
|
| Detection Method: |  |
| Confidence: | 107.0 |
| Match: | 1oy6A |
| Description: | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains; Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains; Multidrug efflux transporter AcrB transmembrane domain |
Matching Structure (courtesy of the PDB): |
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