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View Structure Prediction Details

Protein: CE38426
Organism: Caenorhabditis elegans
Length: 340 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38426.

Description E-value Query
Range
Subject
Range
ERAP1_RAT - Endoplasmic reticulum aminopeptidase 1 OS=Rattus norvegicus GN=Erap1 PE=2 SV=2
290.0 [0..13] [340..4]

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Predicted Domain #1
Region A:
Residues: [1-340]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTQKIRHRF ECNLRFLLTW LVLSAIACII YVFVVFGSLL NKTVLPSNNV PSTIPYITVP  60
   61 SEYNVFLQFN STPEAVVREY TGSLQMDFVA RDITQQLFFH RSDKVKINSI SLEDANGTMT 120
  121 APTAGAYDKS TGVQAYIPLA NLTSQESYVL RIDFQGELDS ETGSPRNLQY SLPNGTIRYS 180
  181 IVFGNSVTSS SGLRYLMPCL DSPDFPAVFN FNIRHSPRYR VISNFAGQIQ QSILYTATLF 240
  241 AGSFQLDSSQ VVLALIDTEL APVTVQQNGL TINKYYRQSI VDNISTDRII QFMATRSQQI 300
  301 GKIDVLALPD LTATQQPGIT FYNENDVLRE NVDLGSLGSI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.69897
Match: 2hpoA
Description: No description for 2hpoA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle