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View Structure Prediction Details

Protein: CE37930
Organism: Caenorhabditis elegans
Length: 309 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37930.

Description E-value Query
Range
Subject
Range
gi|39579516, gi|... - gi|39579516|emb|CAE56341.1| Hypothetical protein CBG24013 [Caenorhabditis briggsae], gi|187040564|em...
431.0 [0..2] [307..24]

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Predicted Domain #1
Region A:
Residues: [1-97]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEERILKIGL IISLIIFMCK MHNFILTVDN CKKFNTSVNN VSEGSNDFIV PFINYTKYFI  60
   61 TAPRNKIIMC GIRKSMSLLS TNIMCLLNNV DPFFANN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [98-201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DALNEDWKVE RSCQRNHSFY FPPSELLNDS NTVRLAFIRD PFQRFVSFYL DKCVNSNMCQ  60
   61 SCGTNMTCVV DKIYTGLRKI QTNWNGTVPF TDRMILHTAT YSWN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [202-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CDFRKDFSKW EFIYIEPEKH ERIRAINHLS SVMKKQGVNE TVIGRFQNDM KNGEISYATY  60
   61 KSQKRAEALR LVQEDPYIRN ILHKIYYFDY VLFQLKKDAL DAQFRSTI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle