| Protein: | dop-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 605 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
|
Region A: Residues: [1-362] |
1 11 21 31 41 51
| | | | | |
1 MLAGQHHVTD IESPLMVVLW RVAAGVFLPL VPTMAVFGNV LVIMSVFRER SLQTVTNMLI 60
61 VSLAVSDFMV AIGVMSFGVY YEWNDFKWGL GSFFCHVYQA LDVACSTASI LNLLAISLDR 120
121 YIAIGHPISY AQYGARGGRA MISITIVWGV SVAVALPLLL GVNPMEENDE CELANPYFNM 180
181 ISSIFSFFIP CIAMIILYTI IFRRLRQRER ARSLRQAQRS ENDKISSALL GGAQIARQMG 240
241 KHFKNRTDQI LLEISFQTSS FPTMSESSED ASTISPMINS FNNFLPKKTP YPSTSIPAIP 300
301 ECGSMPNLTI IERPEAEKEK EISIMDLRDT VEMLDDKYSS AILTSFQTSR SFGEELEEIL 360
361 PF
|
| Detection Method: |  |
| Confidence: | 43.045757 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [363-605] |
1 11 21 31 41 51
| | | | | |
1 IDGSNSVKHS REQLHTTRSN TSTTRLLDVK PELRSISVPS IQDEKKLSQK SNDLPFSHQN 60
61 GTHKQKLLPN PGILMKSKST TLLKTNGYMD TDSLNRNSHK KSLADLLAND EFSFSDSMRV 120
121 YKNRLFKSLS RATSGWNKPR PSRHMVKKAT KQMRREHKAT VTLAVVLAVF LFCWLPFFVL 180
181 HLSNSICLII DENSACVGFL PLYLATWLGY LNSSLNPLIY TVFDQRFRNA FRNILSCGIF 240
241 KKR
|
| Detection Method: | |
| Confidence: | 5.23 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
