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View Structure Prediction Details

Protein: aak-1
Organism: Caenorhabditis elegans
Length: 418 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for aak-1.

Description E-value Query
Range
Subject
Range
aak-1 - Protein kinase status:Confirmed UniProt:P45894 protein_id:ABA54413.1
310.0 [0..1] [418..172]

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Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDGDLLSTA CGSPNYAAPE LISNKLYVGP EVDLWSCGVI LYAMLCGTLP FDDQNVPTLF  60
   61 AKIKSGRYTV PYSMEKQAAD LISTMLQVDP VKRADVKRIV NHSWFRIDLP YYLF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.69897
Match: 2fh9A
Description: No description for 2fh9A was found.

Predicted Domain #2
Region A:
Residues: [115-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PECENESSIV DIDVVQSVAE KFDVKEEDVT GALLAEDHHH FLCIAYRLEV NHKRNADESS  60
   61 QKAMEDFWEI GKTM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [189-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KMGSTSLPVG ATTKTNVGRK ILEGLKKEQK KLTWNLGIRA CLDPVETMKH VFLSLKSVDM  60
   61 EWKVLSMYHI IVRSKPTPIN PDPVKVSLQL FALDKKENNK GYLLDFKGLT EDEEAVPPSR 120
  121 CRSRAASVSV TLAKSKSDLN GNSSKVPMSP LSPMSPISPS VNIPKVRVDD ADASLKSSLN 180
  181 SSIYMADIEN SMESLDEVST QSSEPEAPIR SQTMEFFATC HIIMQALLAE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.39794
Match: 2v8qA
Description: No description for 2v8qA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle