| Protein: | sulp-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 725 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sulp-5.
| Description | E-value | Query Range |
Subject Range |
|
|
512.0 | [0..1] | [725..13] |
|
Region A: Residues: [1-264] |
1 11 21 31 41 51
| | | | | |
1 MIHVEEEEYD QLRSFYAKKR RAPMNQVEYD EKYGYQKRLK DGGKFKKRST KVASRYYVPF 60
61 TSVTNFKIFL LNLFPIFGWL PKYDWKNSLT SDVVGGITVG VLQIPQGIAY AILSRQDPIV 120
121 GLYTSIYPVF LYIFFGTSKH ASLGTFAVVA LMTGLAVERE AFIPSDNLNS TLLPGDEALP 180
181 SPIEVSCALV LGVGLIQFLM GVFRLQFLTT YLSDQLIAGF TTGSAVHVLV SQFKELFGLR 240
241 GLVKHSGPGY LIRNVYDTVT NLPK
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [265-336] |
1 11 21 31 41 51
| | | | | |
1 ANFMCCAISL ATMILLHCGK EYINPIMKRK MKSNIPIPWE LVAVIISTIF VALIDANELY 60
61 NVKIVNKIPT GL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [337-515] |
1 11 21 31 41 51
| | | | | |
1 PELSLPNPNL IPRVLPDAIS IAVVVVAVHL SLSKMLAKKY EYEIDAGQEL YALSFTAIGG 60
61 SFFPTFPTSI GLGRTMVGVE SGVKTQVATF FSCLFVLSVS LYFGRFLETL PMCVLSAIIV 120
121 IALKSMLWKL RDLKGIWKLS KIDCCIWMVA FFATVLVDVS EGLLIAIFFA LFTTILREQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [516-725] |
1 11 21 31 41 51
| | | | | |
1 YPKWHLLANV KDTDEFSDTQ QYQETIFYKG ICIFKFDAPL LFHNVECFKK CIEKVYDEWK 60
61 KSSEFNFVKE PNAGKGSKFT FEGMHRIAPI TEIPLHPGIN RDPILPRHFV IDCSGFTFID 120
121 LMGVSALKEV FSDLRKKRVQ VYFASTKVPV REMFEKCSFF DFVSKENFYP TLRDATGIAR 180
181 LRQTEFGSLD TTSIPEFDEI SNVTNNYPTQ
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 1sboA |
| Description: | Solution Structure of putative anti sigma factor antagonist from Thermotoga maritima (TM1442) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.23164933258149 | bayes_pls_golite062009 |
| protein binding | 1.6097880273634 | bayes_pls_golite062009 |
