| Protein: | acr-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 598 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for acr-5.
| Description | E-value | Query Range |
Subject Range |
|
|
427.0 | [0..9] | [585..11] |
|
Region A: Residues: [1-97] |
1 11 21 31 41 51
| | | | | |
1 MLPNIILILL IRYCSCGAGS RVYEKYGKQV QLSPATTSSY REWYDSNREH STRNNTNVDD 60
61 FQTQLKKSLE NTTAAYNATF MQELIEERQR YLEKLNE
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [98-440] |
1 11 21 31 41 51
| | | | | |
1 GQFINDQRRL VEELLDPNYY EKTVHPKRDY TRPTRVNLSM SLYQILDVDE HMQSIEVNVW 60
61 MVQHWYDEFL DWNPVDYGMI NRTIVPYHQI WIPDTYLYNS EELEQKKTES LMNAQLETGH 120
121 WNQKKDGAKV QLMFPAIYKL SCRMDVRWFP YDRQNYKTSF KPMKLLQQTI DYWPLSSTVN 180
181 LGNMARNDEW EVISFEFVRV EETFKCCTAP WVMLYAHLVI RRKPLYYMIN LVVPTSIITI 240
241 VAVTGFFTPT SSSSERDEKL YLGINTLLTM SVMMLMVCNQ MPSTSTYVPL MSWYYIGIIM 300
301 VIVVGTFLAT GVLAIHGQKH YNKPISDRIR KLIYNPVVEF FIL
|
| Detection Method: | |
| Confidence: | 74.09691 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [441-598] |
1 11 21 31 41 51
| | | | | |
1 SPPTSLIDLW TEFGVISEQR HSTHLDPLLL QHMDPISHTT RADPQHFFGS ISSQMCDLQS 60
61 TYSYTARLAT ITRQYTQHAK MKALRKNQYR MSMDTSQARG VKKQKMQRRC SLEWEFLANV 120
121 LDRILLTIFC GFTFAVFIIL IGFDSFFTFH TDSPPKTM
|
| Detection Method: | |
| Confidence: | 40.30103 |
| Match: | 1oedB |
| Description: | Acetylcholine receptor protein, beta chain |
Matching Structure (courtesy of the PDB): |
|
