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View Structure Prediction Details

Protein: CE38383
Organism: Caenorhabditis elegans
Length: 178 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38383.

Description E-value Query
Range
Subject
Range
gi|31322226 - gi|31322226|gb|AAO63560.1| nitrate reductase [Verticillium fungicola]
169.0 [0..1] [176..456]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGRGTSFNR FFRHRRQFNK LSGATSEHQR TNENHSYYKY AYIGGAATAG VLGFKHFVKT  60
   61 AKLDHAKDET MSEKKLE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.221849
Match: 2bihA
Description: crystal structure of the Molybdenum-containing nitrate reducing fragment of Pichia angusta assimilatory nitrate reductase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [78-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLQIYKQEEV KKHGKDADRI WVTYKDGVYD VTDFIAMHPG GDKILLAAGA AVDPFWALYS  60
   61 QHKTKEVLEI LEGYRIGKLD VKDVPKIDFE DLSNVSLVDF N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.30103
Match: 1soxA
Description: Sulfite oxidase, C-terminal domain; Sulfite oxidase, N-terminal domain; Sulfite oxidase, middle catalytic domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle