| Protein: | unc-39 |
| Organism: | Caenorhabditis elegans |
| Length: | 335 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-39.
| Description | E-value | Query Range |
Subject Range |
|
|
205.0 | [0..89] | [327..1] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MTDHPPIDTS SYFDCYQQHQ LPLQYTFTSS SNSNTSNSST SPSHISDQFS SSGGPPYELS 60
61 SHILTPSSVI PTPSPSVASA SISSPTIP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [89-335] |
1 11 21 31 41 51
| | | | | |
1 AFGCTMSEYS MEQMEAISTS LFQARDGDRL VAFFKQLESL YGPNAVDHLR SEAIIVAYTY 60
61 ALYHSNEFET LFHLLSNRHF QQRHYNDLQD IWHHARYKES QLKRGKELNP VEKYRLRRKF 120
121 PAPKTIWDGE EIVYSFKDSS RKFLKQFFRN VSEYPTQEQK REISRATGLK IVQISNWFKN 180
181 RRQRDKSNNS AKCSPPSSSS STNGGSDFLP IITPQSFNLA AAPFNMNMIY GTLRDSQSDN 240
241 DQFTFNP
|
| Detection Method: | |
| Confidence: | 27.30103 |
| Match: | 1cqtA |
| Description: | Oct-1 POU Homeodomain; Oct-1 |
Matching Structure (courtesy of the PDB): |
|
