| Protein: | smk-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 536 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for smk-1.
| Description | E-value | Query Range |
Subject Range |
|
|
505.0 | [0..168] | [535..231] |
|
Region A: Residues: [1-230] |
1 11 21 31 41 51
| | | | | |
1 MSDTKEVSDD PMELGTSSTV IAKEENDKES LKRMEVDDEK EPEEEIVEKT EEKQEEEDVT 60
61 VKLEDETETE VESVDGGQEE KEVVDEKQVD AERVNTKTEE LSPKKEVKAE EDPETETKKK 120
121 DPSEQTNGQV KKKSDKQSPK KKEKSEGKEN SPGSKLTNRD HILDHLDIKR DATNRVKLYV 180
181 LCDQRIWEDR GTGHVVTHQL SAEDGAPSNA GNTMVLVRLE GQNKNMLESR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [231-308] |
1 11 21 31 41 51
| | | | | |
1 IQMDTVYQKQ QETLIVWSET DVMDLALSFQ EKSGCEELWQ KICEVQGRDP GDPDATFDDG 60
61 DDSDVGEMPS SASRLQLP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [309-536] |
1 11 21 31 41 51
| | | | | |
1 PIEIGRLGEL DALLHMHLTT NSAREKMTLA IENDNVVTKL CEVFRMCEDI EHTEGLRTFY 60
61 SIVKNLFMLN RNTVIEMLLD DNNIKDVIGM FEFDPAYKHP RKHRDFVYKK AKFREVLNIS 120
121 CDELRDKIHR LYRAQYIQDA CLPSLGLFEE NLLSTLSSHV FFCRVDIVTL LQKDKKAMSE 180
181 LFGQLISEET DVIRRRDLAL FLKEMISLST SIPSNGPAAT KETFFKVV
|
| Detection Method: | |
| Confidence: | 41.09691 |
| Match: | PF04802.6 |
| Description: | No description for PF04802.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
