| Protein: | sulp-3 |
| Organism: | Caenorhabditis elegans |
| Length: | 782 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sulp-3.
| Description | E-value | Query Range |
Subject Range |
|
|
509.0 | [0..1] | [782..1] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MYKKMSLRQL FSDRPPLNAV LQEKAQKLRY ACSPSKCIHS LLSFLPIITW LPKYDWSHSF 60
61 FGDLSGGLTM AVFSVPQGIA LASITGVPPV YGLYTAIFPS F
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [102-273] |
1 11 21 31 41 51
| | | | | |
1 LYIFFGTSKH NALGGFAVLS LMTHGAIEKV MLRTATSYNA TAYVNHTLDE LLDKENETAL 60
61 ISNTTLMQIL GNETSFVEEV TMEMWTEGVT PVKQIHVATT IIFLAGVIQV FMGVFRLQYL 120
121 TSLFSEQVMS GFVVGGGIHV FFAQIGNMLG IELPRRSGPG YLYYRIWDLV EN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [274-427] |
1 11 21 31 41 51
| | | | | |
1 LDNVHIPTVC ISLSSFLFLV FGKEYLAPWL NSAFNYPVPF ELVLVVVGIT ATNYAELSLR 60
61 HDVKVVGNIP TEFPPPSLPR FDLIRHIGLN AAAIAITAVA IHITVAKVVE KRYKYKINHG 120
121 QELYALGFVG VLSSFFPVFP VTSGFARSVV GAAV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [428-525] |
1 11 21 31 41 51
| | | | | |
1 GGSTQLTCLF SSLALLSVIL CIGPALEYLP QCILSAMIIF AQKGMLEKFG ELKSLWPVFK 60
61 IDFTIWLMSF FLTVCYDMGE GLLMAIGFAV LTTIIRTQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [526-588] |
1 11 21 31 41 51
| | | | | |
1 RPKWHFLSRD DDTENYKETK KRDLERIQGN VCIFRMDAPL IFTSSDRFTM SVWQCVKKWE 60
61 RCK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [589-709] |
1 11 21 31 41 51
| | | | | |
1 SESFVTIEQM NSDRSADIFD SKLKSARRRW KRDQKSENRC KLVIDCDGFP YVDYLGLSTL 60
61 KSVYVDLQAA GIQCFFVVQK SDLKKLFRAT DFYEVVDESK VFNKVGDAVK AAEQHISSPK 120
121 T
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1sboA |
| Description: | Solution Structure of putative anti sigma factor antagonist from Thermotoga maritima (TM1442) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.23164933258149 | bayes_pls_golite062009 |
| protein binding | 1.6097880273634 | bayes_pls_golite062009 |
|
Region A: Residues: [710-782] |
1 11 21 31 41 51
| | | | | |
1 TKEILTALAS IATTDTVLID EESSDSNDND DAEIQERITE ESENSEEVMS ETSVSIEDAT 60
61 SLTSSRNSIN SEE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
