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View Structure Prediction Details

Protein: ttll-9
Organism: Caenorhabditis elegans
Length: 417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ttll-9.

Description E-value Query
Range
Subject
Range
gi|68401544, gi|... - gi|68401552|ref|XP_685329.1| PREDICTED: similar to CG32238-PA [Danio rerio], gi|68401544|ref|XP_6847...
390.0 [0..1] [385..1]

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Predicted Domain #1
Region A:
Residues: [1-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSISNELSV TSSQNVISNS KEQRKKKILF KCALTNTISD VLTNREGWAQ TQGDDWQFFW  60
   61 VTREWMTTCY DKHKFSEKQM ICHFRNDFEL TRKDFLIKNY KKARKAKEKS GIDVVSEFNF 120
  121 LPSSYVLPTE YHLFVEEFRK YPNDTIWIMK PVAGAQGKGI FLFRKLKHVQ EWKKKDSSGS 180
  181 EALPYVVQCY VHNPYLVGGK KFDVRIYVLV TSFRPLNAWV HREGFARFSH SRYSTDSVDD 240
  241 AFVHLTNVAV AKTAADYDPE RGLKWSLPKL FRFFKSVHGQ SKLSKTMNDL TNVIIESLKS 300
  301 VQNLIIQDNH CFELYGYDIL FDENLKPWLL EVNASPSLTA SSQEDFELKY RILNHMIDVL 360
  361 DIEKKLIGNE NEVGGFDLLI KNSKPVELCK VDFHTQPFFG TQFNLRLGDY VEATPMP

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.82
Match: 2p0aA
Description: No description for 2p0aA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle