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View Structure Prediction Details

Protein: egl-9
Organism: Caenorhabditis elegans
Length: 465 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for egl-9.

Description E-value Query
Range
Subject
Range
egl-9 - status:Confirmed UniProt:O45918 protein_id:CAA94893.2
408.0 [0..36] [465..294]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLRTIVAPT SYGIPTPMPS QSRWKPYSKT MKPSIIETEG GSKPTVSRTR KRPTPSNSAD  60
   61 PKINYKDHNK NVVYSTTLQE HQKHLQNRGL ALSI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [95-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HQAMVLRLRY IAEHVIRSLN EFGWAVVDNF LGSDHYKFTA KEIERLYERG LFSPGQLMEA  60
   61 KHKDEFHIKD IRSDHIYWYD GYDGRAKDAA TVRLLISMID SVIQHFKKRI DHDIGGRSRA 120
  121 MLAIYPGNGT RYVKHVDNPV KDGRCITTIY YCNENWDMAT DGGTLRLYPE TSMTPMDIDP 180
  181 RADRLVFFWS DRRNPHEVMP VFRHRFAITI WYMDKSERDK ALAKGKESDA ACASKKENDP 240
  241 TSSSLNSLIG S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.69897
Match: 2g1mA
Description: No description for 2g1mA was found.

Predicted Domain #3
Region A:
Residues: [346-465]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLRPRKNPST HDLSKLDLRL FPSTSSDPAL VSAADEDRVD ISADFQSTSS LAHPESTDSG  60
   61 VSLSTFNVAH NHMERTTSLQ SISDHFRSER SHERRSSTSS DQDLDEGLPP PPSTNPEYYI 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle