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View Structure Prediction Details

Protein: CE38801
Organism: Caenorhabditis elegans
Length: 244 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE38801.

Description E-value Query
Range
Subject
Range
gi|39581816, gi|... - gi|39581816|emb|CAE74189.1| Hypothetical protein CBG21864 [Caenorhabditis briggsae], gi|187022329|em...
gi|157760817 - gi|157760817|ref|XP_001672751.1| Hypothetical protein CBG21864 [Caenorhabditis briggsae AF16]
305.0 [0..43] [242..26]

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Predicted Domain #1
Region A:
Residues: [1-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHGFLREFP ISKSYISCGT TFHMLLSHFK FNFSHFPDFY KTLLLAVCCF SAVDGFRNVC  60
   61 SGSDLSVRSN LDVKQLSELL KEDPCTHVAG DVVIENLTDI AIPIEVYKRV RHVHGSIIIA 120
  121 NNTNISSPIH FPSLRSINAS LLPCILVLFN ENVKFSVGGQ FSKALTQHPI KFAVLKNKNR 180
  181 VIDMNDYNLW YLAGHPARTF LIDSSLSAEI CLEDVFKPLA GIMGFLFVAL ASALSTILFY 240
  241 DRSN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.61
Match: 2hr7A
Description: No description for 2hr7A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle