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View Structure Prediction Details

Protein: atx-2
Organism: Caenorhabditis elegans
Length: 634 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for atx-2.

Description E-value Query
Range
Subject
Range
gi|113413027 - gi|113413027|ref|XP_001133384.1| PREDICTED: hypothetical protein [Homo sapiens]
173.0 [0..3] [634..2]

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Predicted Domain #1
Region A:
Residues: [1-536]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKGKGQNQG HDHSFRQQQK QMLDPRPNNN VKPADDKAQS ATTATAAAGG SRVTDLKNWG  60
   61 NEFSIATAPK DQAPAVPAGN SGSAWNRGPP SSLVAKGSSN ESTPPPTTNG EEAETKKEEA 120
  121 PSTSVDVAAA PVQNVQNDAE KHQEDDNVSV TSENDSVITS KSSSFKFNIN APEFKPRVAP 180
  181 ATPTATTPVQ NEYHPQQQPH PAMMAPQQGP PAPGMGMVPP HMGGPQNQGQ PPMMMWQQTG 240
  241 QQQQGGGGYP QNHQFPIQHV PMQGVPGQMY GPGAATPVTV AQQPNQQHQV PTSAAGGQNH 300
  301 QLRDGEYREK QPLYMPYGPP QMVPVTSQQF YHSQYQGQMQ QAAPYQMKMM PQQAPQGAYQ 360
  361 QRYQQPQVYM MPPQGQQQQP RYQGPPPPQQ QQQQQPQQQQ FSGEQSRPQS HPNSQPTTPG 420
  421 PRGELPKMSG APQNGNMQAE SSSNASHSGS TSSQSGQRSG SPPGAVPPPP PPQQQHQQQQ 480
  481 HPPHHAPPHV GAPPPQMMQQ QQQHIQQYMV MQGPHQMHPQ IPNYYQQPQQ VFYPMI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.39794
Match: 1y0fA
Description: No description for 1y0fA was found.

Predicted Domain #2
Region A:
Residues: [537-634]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQQMPMQQN QHPQQSLMGE RSDQGFPTSG YFDYRTMPNY QQQQQQQQQQ MHRQNSLPQQ  60
   61 FQGNQGVNPS GQQSGPPPPP PPSQQGTPRD QQHSQSPP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.221849
Match: 1y0fB
Description: No description for 1y0fB was found.

YRC Informatics Platform - Version 3.0
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