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View Structure Prediction Details

Protein: hsp-25
Organism: Caenorhabditis elegans
Length: 108 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for hsp-25.

Description E-value Query
Range
Subject
Range
gi|46371976 - gi|46371976|gb|AAS90623.1| putative low molecular weight heat shock protein [uncultured soil bacteri...
110.0 [0..8] [108..35]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHRPTYDPY LDNLKSPLIK DESDGKTLRL RFDVANYKPE EVTVKTIDNR LLVHAKHEEK  60
   61 TPQRTVFREY NQEFLLPRGT NPEQISSTLS TDGVLTVEAP LPQLAIQQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.0
Match: 1gmeA
Description: Small heat shock protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle